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Archive for the ‘bioengineering’ category: Page 16

Jul 8, 2023

Engineering cellular communication between light-activated synthetic cells and bacteria

Posted by in categories: bioengineering, biotech/medical, chemistry

Synthetic cells are a versatile technology with the potential to serve as smart delivery devices or as chassis for creating life from scratch. Despite the development of new tools and improvements in synthetic cell assembly methods, the biological parts used to regulate their activity have limited their reach to highly controlled laboratory environments12. In the field’s preliminary work, well-established arabinose and IPTG-inducible transcription factors and theophylline-responsive riboswitches were used to control in situ gene expression5,6. Still, each performed poorly in vitro and represented a leaky, insensitive route of transcription/translation control. Later, the transition to AHSL-sensitive transcription factors afforded synthetic cells the ability to sense and produce more biologically useful QS molecules, which are central to coordinating collective bacterial behaviors. Although this marked considerable progress toward integrating synthetic cells with living cells, the most frequently adopted QS systems used to date, LuxR/LuxI and EsaR/EsaI, recognize and synthesize the same AHSL (3OC6-HSL), limiting the variety of synthetic cell activators that work orthogonally5,7,10,11.

In this work, we diverged from using naturally derived parts to control gene expression, instead utilizing chemically modified LA-DNA templates to tightly and precisely control the location of synthetic cell activation with UV light. This LA-DNA approach was subsequently implemented to regulate communication with E. coli cells using the BjaI/BjaR QS system, adding this unique branched AHSL into the synthetic cell communication toolbox. We believe this system is ideally suited to synthetic cell communication. It couples an acyl-CoA-dependent synthase, BjaI, which efficiently synthesizes IV-HSL from its commercially available substrates, IV-CoA and SAM, with a highly sensitive IV-HSL-dependent transcription factor, BjaR, that activates gene expression at picomolar concentrations of IV-HSL.

Jul 6, 2023

Artificial cells demonstrate that ‘life finds a way’

Posted by in categories: bioengineering, biotech/medical, education, evolution

Evolutionary biologist Jay T. Lennon’s research team has been studying a synthetically constructed minimal cell that has been stripped of all but its essential genes. The team found that the streamlined cell can evolve just as fast as a normal cell—demonstrating the capacity for organisms to adapt, even with an unnatural genome that would seemingly provide little flexibility.

Details about the study can be found in a paper featured in Nature. Roy Z. Moger-Reischer, a Ph.D. student in the Lennon lab at the time of the study, is first author on the paper.

“Listen, if there’s one thing the history of evolution has taught us is that life will not be contained. Life breaks free. It expands to new territories, and it crashes through barriers painfully, maybe even dangerously, but… ife finds a way,” said Ian Malcolm, Jeff Goldblum’s character in Jurassic Park, the 1993 science fiction film about a park with living dinosaurs.

Jul 5, 2023

Scientists Just Created Artificial Cells That Evolve Faster Than Natural Ones

Posted by in categories: bioengineering, biotech/medical

Minimal cells are synthetic cells with streamlined genomes. New study find these sorts of cells are still able to grow and evolve.

Jul 5, 2023

Robot skin heals

Posted by in categories: bioengineering, biotech/medical, cyborgs, robotics/AI

Robotic finger. Illustration showing the cutting and healing process of the robotic finger (A), its anchoring structure (B) and fabrication process ©. ©2022 Takeuchi et al.

Researchers from the University of Tokyo pool knowledge of robotics and tissue culturing to create a controllable robotic finger covered with living skin tissue. The robotic digit has living cells and supporting organic material grown on top of it for ideal shaping and strength. As the skin is soft and can even heal itself, the finger could be useful in applications that require a gentle touch but also robustness. The team aims to add other kinds of cells into future iterations, giving devices the ability to sense as we do.

Professor Shoji Takeuchi is a pioneer in the field of biohybrid robots, the intersection of robotics and bioengineering. Together with researchers from around the University of Tokyo, he explores things such as artificial muscles, synthetic odor receptors, lab-grown meat, and more. His most recent creation is both inspired by and aims to aid medical research on skin damage such as deep wounds and burns, as well as help advance manufacturing.

Jul 4, 2023

AI combined with CRISPR precisely controls gene expression

Posted by in categories: bioengineering, biotech/medical, robotics/AI

Artificial intelligence can predict on-and off-target activity of CRISPR tools that target RNA instead of DNA, according to new research published in Nature Biotechnology.

The study by researchers at New York University, Columbia University, and the New York Genome Center, combines a with CRISPR screens to control the expression of human in different ways—such as flicking a light switch to shut them off completely or by using a dimmer knob to partially turn down their activity. These precise gene controls could be used to develop new CRISPR-based therapies.

CRISPR is a gene editing technology with many uses in biomedicine and beyond, from treating sickle cell anemia to engineering tastier mustard greens. It often works by targeting DNA using an enzyme called Cas9. In recent years, scientists discovered another type of CRISPR that instead targets RNA using an enzyme called Cas13.

Jun 30, 2023

Dr. Brad Ringeisen, Ph.D. — Executive Director, Innovative Genomics Institute (IGI)

Posted by in categories: bioengineering, biotech/medical, chemistry, food, genetics, governance, health, neuroscience

Is the Executive Director of the Innovative Genomics Institute (https://innovativegenomics.org/people/brad-ringeisen/), an organization founded by Nobel Prize winner Dr. Jennifer Doudna, on the University of California, Berkeley campus, whose mission is to bridge revolutionary gene editing tool development to affordable and accessible solutions in human health and climate.

Dr. Ringeisen is a physical chemist with a Ph.D. from the University of Wisconsin-Madison, a Bachelor of Science in chemistry from Wake Forest University, a pioneer in the field of live cell printing, and an experienced administrator of scientific research and product development.

Continue reading “Dr. Brad Ringeisen, Ph.D. — Executive Director, Innovative Genomics Institute (IGI)” »

Jun 28, 2023

David Zuniga, Senior Director, In-Space Solutions, Axiom Space — Developing Low Earth Orbit Economy

Posted by in categories: bioengineering, business, economics, government, policy, space

Developing The Low Earth Orbit Economy On The World’s First Commercial Space Station — David Zuniga, Senior Director, In-Space Solutions, Axiom Space


David Zuniga is Senior Director of In-Space Solutions at Axiom Space (https://www.axiomspace.com/), a space infrastructure developer headquartered in Houston, Texas, which plans human spaceflight for government-funded and commercial astronauts, engaging in in-space research, in-space manufacturing, and space exploration. The company aims to own and operate the world’s first commercial space station, and Mr. Zuniga helps to develop strategy and growth around Axiom’s Low Earth Orbit (LEO) economy, also playing a critical role in business and technical integration of Axiom’s in-space manufacturing and research capabilities for Axiom Station architecture.

Continue reading “David Zuniga, Senior Director, In-Space Solutions, Axiom Space — Developing Low Earth Orbit Economy” »

Jun 18, 2023

Fabrication of Nanofiltration Membranes via Surface and Interface Engineering

Posted by in categories: bioengineering, chemistry, sustainability

A team of researchers successfully constructed nanofiltration membranes with superior quality using the mussel-inspired deposition methods. Such was achieved via a two-part approach to fabricate the thin-film composite (TFC) nanofiltration membranes. Firstly, the substrate surface was coated through fast and novel deposition to form a dense, robust, and functional selective layer. Then, the structure controllability of the selective layer was enhanced by optimizing the interfacial polymerization (IP) process. As a result, the properties of nanofiltration membranes produced are with high durability and added functionality. When put into a bigger perspective, these high-performance TFC nanofiltration membranes are potential solutions to a number of fields, including water softening, wastewater treatment, and pharmaceutical purification. Hence, there is a need to further explore and expand the application in an industrial scale instead of being bound within the walls of the laboratories.

Membrane-based technologies, especially enhanced nanofiltration systems, have been highly explored due to their myriad of distinct properties, primarily for their high efficiency, mild operation, and strong adaptability. Among these, the TFC nanofiltration membranes are favoured for their smaller molecular weight cutoff, and narrower pore size distribution which lead to higher divalent and multivalent ion rejection ability. Moreover, these membranes show better designability owing to their thin selective layer make-up and porous support with different chemical compositions. However, the interfacial polymerization (IP) rate of reaction is known to affect the permeability and selectivity of the TFC nanofiltration membranes by weakening the controllability of the selective layer structure. Therefore, this study was designed to improve the structural quality of the TFC nanofiltration membranes through surface and interface engineering, and subsequently, increase the functionality.

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Jun 17, 2023

TIMELAPSE OF SPACE COLONIZATION (2052 — 2301+)

Posted by in categories: bioengineering, cosmology, education, governance, quantum physics, robotics/AI, space travel

A sci fi documentary exploring a timelapse of future space colonization. Travel through 300 years, from 2052 to 2,301 and beyond, and see how modern science fiction becomes reality.

Witness the journey of humans expanding from Earth, to the Moon, to Mars, and beyond.

Continue reading “TIMELAPSE OF SPACE COLONIZATION (2052 — 2301+)” »

Jun 11, 2023

Researchers advance DNA nanostructure stability

Posted by in categories: bioengineering, biotech/medical, computing, genetics, nanotechnology

Researchers at the University at Albany’s RNA Institute have demonstrated a new approach to DNA nanostructure assembly that does not require magnesium. The method improves the biostability of the structures, making them more useful and reliable in a range of applications. The work appears in the journal Small this month.

When we think of DNA, the first association that comes to mind is likely genetics—the within cells that houses an organism’s blueprint for growth and reproduction. A rapidly evolving area of DNA research is that of DNA nanostructures—synthetic molecules made up of the same as the DNA found in living cells, which are being engineered to solve critical challenges in applications ranging from medical diagnostics and delivery to materials science and data storage.

“In this work, we assembled DNA nanostructures without using magnesium, which is typically used in this process but comes with challenges that ultimately reduce the utility of the nanostructures that are produced,” said Arun Richard Chandrasekaran, corresponding author of the study and senior research scientist at the RNA Institute.

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