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Archive for the ‘biological’ category: Page 164

Jun 10, 2019

AI software reveals the inner workings of short-term memory

Posted by in categories: biological, neuroscience, robotics/AI

Research by neuroscientists at the University of Chicago shows how short-term, working memory uses networks of neurons differently depending on the complexity of the task at hand.

The researchers used modern artificial intelligence (AI) techniques to train computational neural networks to solve a range of complex behavioral tasks that required storing information in short term . The AI networks were based on the biological structure of the brain and revealed two distinct processes involved in short-term memory. One, a “silent” process where the brain stores short-term memories without ongoing neural activity, and a second, more active process where circuits of fire continuously.

The study, led by Nicholas Masse, Ph.D., a senior scientist at UChicago, and senior author David Freedman, Ph.D., professor of neurobiology, was published this week in Nature Neuroscience.

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Jun 10, 2019

One Step Closer to Deep Learning on Neuromorphic Hardware

Posted by in categories: biological, robotics/AI, transportation

A group of researchers at Sandia National Laboratories have developed a tool that can cross-train standard convolutional neural networks (CNN) to a spiking neural model that can be used on neuromorphic processors. The researchers claim that the conversion will enable deep learning applications to take advantage of the much better energy efficiency of neuromorphic hardware, which are designed to mimic the way the biological neurons work.

The tool, known as Whetstone, works by adjusting artificial neuron behavior during the training phase to only activate when it reaches an appropriate threshold. As a result, neuron activation become a binary choice – either it spikes or it doesn’t. By doing so, Whetstone converts an artificial neural network into a spiking neural network. The tool does this by using an incremental “sharpening process” (hence Whetstone) through each network layer until the activation becomes discrete.

According to Whetstone researcher Brad Aimone, this discrete activation greatly minimizes communication costs between the layers, and thus energy consumption, but with only minimal loss of accuracy. “We continue to be impressed that without dramatically changing what the networks look like, we can get very close to a standard neural net [in accuracy],” he says. “We’re usually within a percent or so on performance.”

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Jun 8, 2019

Quantum Biology May Help Solve Some of Life’s Greatest Mysteries

Posted by in categories: biological, neuroscience, quantum physics

From the remarkable speed of enzyme-catalyzed reactions to the workings of the human brain, numerous biological puzzles are now being explored for evidence of quantum effects.

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Jun 1, 2019

To defend against phages, bacteria take ‘naps’

Posted by in category: biological

Microbes under attack by bacteriophages turn their defenses on their enemies and themselves. It doesn’t kill them, though.

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May 22, 2019

Self-replicator that is simultaneously created and destroyed may lead to better understanding of life

Posted by in category: biological

As living organisms eat, grow, and self-regenerate, all the while they are slowly dying. Chemically speaking, this is because life is thermodynamically unstable, while its ultimate waste products are in a state of thermal equilibrium. It’s somewhat of a morbid thought, but it’s also one of the characteristics that is common to all forms of life.

Now in a new study, have created a self-replicator that self-assembles while simultaneously being destroyed. The synthetic system may help researchers better understand what separates biological matter from simpler chemical matter, and also how to create synthetic life in the lab.

The researchers, Ignacio Colomer, Sarah Morrow, and Stephen P. Fletcher, at the University of Oxford, have published a paper on the self-replicator in a recent issue of Nature Communications.

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May 19, 2019

Where is the Origin of Life on Earth?

Posted by in categories: bioengineering, biological, chemistry, evolution, physics

To answer the iconic question “Are We Alone?”, scientists around the world are also attempting to understand the origin of life. There are many pieces to the puzzle of how life began and many ways to put them together into a big picture. Some of the pieces are firmly established by the laws of chemistry and physics. Others are conjectures about what Earth was like four billion years ago, based on extrapolations of what we know from observing Earth today. However, there are still major gaps in our knowledge and these are necessarily filled in by best guesses.

We invited talented scientists to discuss their different opinions about the origin of life and the site of life’s origin. Most of them will agree that liquid water was necessary, but if we had a time machine and went back in time, would we find life first in a hydrothermal submarine setting in sea water or a fresh water site associated with emerging land masses?

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May 16, 2019

The Universal Pattern Popping Up in Math, Physics and Biology

Posted by in categories: biological, mathematics, physics

Quanta’s In Theory video series returns with an exploration of a mysterious mathematical pattern found throughout nature.

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May 15, 2019

Worms Frozen for 42,000 Years in Siberian Permafrost Came Back to Life and Started Eating

Posted by in categories: biological, food

“Thus, our data demonstrate the ability of multicellular organisms to survive long-term (tens of thousands of years) cryobiosis under the conditions of natural cryoconservation,” the researchers said in a study published in Doklady Biological Sciences.

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May 14, 2019

Indeterminate nature: the resurgence of quantum biology

Posted by in categories: biological, quantum physics

A melding of biology and physics first suggested in the 1920s is enjoying a revival as evidence mounts. Stephen Fleischfresser reports.

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May 14, 2019

It’s not just fish, plastic pollution harms the bacteria that help us breathe

Posted by in category: biological

“We looked at a group of tiny, green bacteria called Prochlorococcus which is the most abundant photosynthetic organism on Earth, with a global population of around three octillion (~1027) individuals,” says Sasha.


Ten per cent of the oxygen we breathe comes from just one kind of bacteria in the ocean. Now laboratory tests have shown that these bacteria are susceptible to plastic pollution, according to a study published in Communications Biology.

“We found that exposure to chemicals leaching from interfered with the growth, photosynthesis and oxygen production of Prochlorococcus, the ocean’s most abundant photosynthetic bacteria,” says lead author and Macquarie University researcher Dr. Sasha Tetu.

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