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How your life story leaves epigenetic fingerprints on your immune cells

The COVID-19 pandemic gave us tremendous perspective on how wildly symptoms and outcomes can vary between patients experiencing the same infection. How can two people infected by the same pathogen have such different responses? It largely comes down to variability in genetics (the genes you inherit) and life experience (your environmental, infection, and vaccination history).

These two influences are imprinted on our cells through small molecular alterations called epigenetic changes, which shape cell identity and function by controlling whether genes are turned “on” or “off.”

Salk Institute researchers are debuting a new epigenetic catalog that reveals the distinct effects of genetic inheritance and life experience on various types of immune cells. The new cell type-specific database, published in Nature Genetics, helps explain individual differences in immune responses and may serve as the foundation for more effective and personalized therapeutics.

3D material mimics graphene’s electron flow for green computing

University of Liverpool researchers have discovered a way to host some of the most significant properties of graphene in a three-dimensional (3D) material, potentially removing the hurdles for these properties to be used at scale in green computing. The work is published in the journal Matter.

Graphene is famous for being incredibly strong, lightweight, and an excellent conductor of electricity and its applications range from electronics to aerospace and medical technologies. However, its two-dimensional (2D) structure makes it mechanically fragile and limits its use in demanding environments and large-scale applications.

Synthetic ‘muscle’ with microfluidic blood vessels shows promise for soft robotics

Researchers are continuing to make progress on developing a new synthetic material that behaves like biological muscle, an advancement that could provide a path to soft robotics, prosthetic devices and advanced human-machine interfaces. Their research, recently published in Advanced Functional Materials, demonstrates a hydrogel-based actuator system that combines movement, control and fuel delivery in a single integrated platform.

Biological muscle is one of nature’s marvels, said Stephen Morin, associate professor of chemistry at the University of Nebraska–Lincoln. It can generate impressive force, move quickly and adapt to many different tasks. It is also remarkable in its flexibility in terms of energy use and can draw on sugars, fats and other chemical stores, converting them into usable energy exactly when and where they are needed to make muscles move.

A synthetic version of muscle is one of the Holy Grails of material science.

Data-driven 3D chromosome model reveals structural and dynamic features of DNA

Chromosomes are masters of organization. These long strings of DNA fold down into an ensemble of compact structures that keep needed parts of the genome accessible while tucking away those that aren’t used as often. Understanding the complexity of these structures has been challenging; chromosomes are large systems, and deciphering the structure and dynamics requires a combination of experimental data and theoretical approaches.

The FI-Chrom method, described in a recent publication by Rice’s José Onuchic and Vinícius Contessoto, is a new and effective approach for creating 3D maps of chromosomes from real-world data.

The study is published in the journal Proceedings of the National Academy of Sciences.

New study finds heart attacks involve brain and immune system, not just heart

Arteries become clogged. Blood flow is restricted and oxygen is cut off. The result is a heart attack, the world’s leading cause of death.

The conventional approach to studying and treating these episodes is to focus on the heart as an isolated organ. University of California San Diego research, led by the School of Biological Sciences, is upending the way heart attacks are viewed under a transformative new understanding of how cardiac events are interconnected with other systems.

In a study published in the journal Cell, Postdoctoral Scholar Saurabh Yadav, Assistant Professor Vineet Augustine and their colleagues describe a comprehensive new picture of heart attacks and their resulting damage by connecting the heart, the brain and the nervous and immune systems.

Decoding TREM2 Signaling PathwaysLinking Macrophage Glycolysis to Inflammatory Diseases in the CNS

Review: decoding TREM2 signaling pathways—linking macrophage glycolysis to inflammatory diseases in the CNS.


Triggering receptor expressed on myeloid cells 2 (TREM2) is a key immunomodulatory receptor broadly expressed on myeloid cells such as macrophages and microglia. It plays versatile roles in neurodegenerative diseases, tissue repair, and tumor immunity by orchestrating glucose metabolism and inflammatory responses. This review systematically summarizes the structural characteristics of TREM2, its ligand-binding mechanisms, and downstream signaling pathways—including the phosphoinositide 3-kinase/protein kinase B(PI3K/Akt), mitogen-activated protein kinase (MAPK), nuclear factor kappa-light-chain-enhancer of activated B cells (NF-κB), and signal transducer and activator of transcription 3 (STAT3) cascades—with a particular focus on its central role in macrophage metabolic reprogramming.

In neurodegenerative diseases such as Alzheimer disease, TREM2 contributes to the attenuation of neuroinflammation and slows disease progression by promoting β-amyloid (Aβ) clearance, inhibiting tau hyperphosphorylation, and modulating microglial polarization. Loss-of-function sequence variants, such as R47H, disrupt lipid metabolism, impair phagocytic activity, and destabilize immune homeostasis, thereby significantly increasing disease susceptibility. Furthermore, by enhancing glycolysis and suppressing fatty acid oxidation, TREM2 facilitates macrophage polarization toward a reparative M2 phenotype, promoting neuroregeneration and remyelination in conditions such as spinal cord injury and multiple sclerosis.

Within the tumor microenvironment, TREM2 influences tumor progression and therapeutic resistance by modulating the metabolic reprogramming of tumor-associated macrophages (TAMs)—notably through activation of pyruvate kinase muscle isozyme M2 (PKM2)–dependent glycolysis—and promoting an immunosuppressive phenotype. In metabolic disorders such as diabetes and obesity, TREM2 exerts protective effects by inhibiting NLRP3 inflammasome activation and maintaining lipid homeostasis, highlighting its therapeutic potential.

Micro-ultrasound for prostate cancer

This Review focuses on micro-ultrasound as a new imaging technology in prostate cancer detection, comparing micro-ultrasound performance with that of the current standard MRI. The potential of micro-ultrasound in other applications, including tumour staging and active surveillance, as well as the use of artificial intelligence to support biopsy decision-making, are also discussed, based on completed and ongoing trials.

Abstract: Providing the first comprehensive quantitative proteomics data for primary CD34+ cells from human myelodysplastic syndrome specimens

John D. Crispino & team suggest that suppression of the substrate receptor FBXO11 causes inefficient ubiquitylation of NPM1, contributing to MDS pathogenesis:

The image shows stronger correlation of NPM1 (magenta) and FBXO11 (green) in the nucleoplasm of CD34+ cells compared with the nucleolar subcompartment.


10 Cyrus Tang Medical Institute, Suzhou Medical Collage, Soochow University, Suzhou, Jiangsu Province, China.

11 Department of Pathology, Northwestern University, Chicago, Illinois, USA.

12 Department of Pathology, Division of Comparative Pathology, St. Jude Children’s Research Hospital, Memphis, Tennessee, USA.

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