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Category: biotech/medical – Page 8

Scientists chart over 140,000 DNA loops to map human chromosomes in the nucleus

One of the most detailed 3D maps of how the human chromosomes are organized and folded within a cell’s nucleus is published in Nature.

Chromosomes are thread-like structures that carry a cell’s genetic information inside the nucleus. Rather than existing as loose strands or only as the familiar X-shapes seen in textbooks, chromosomes fold into specific three-dimensional forms. How they fold, the structures they form, and their placement play crucial roles in maintaining proper cellular functions, gene expression, and DNA replication.

The team involved in the 4D Nucleome Project, whose goal was to understand the 3D organization of human chromosomes in the nucleus and how it changes over time, identified over 140,000 DNA looping interactions in human embryonic stem cells and fibroblasts. They also presented computational methods that can predict genome folding solely from its DNA sequence, making it easier to determine how genetic variations—including those linked to disease—affect genome structure and function.

Prolonging lung cancer response to EGFR inhibition by targeting the selective advantage of resistant cells

The emergence of resistant subpopulations often underlies the development of resistance to cancer therapy. Here, using a DNA barcoding approach, the authors demonstrate EGFR TKI treatment in non-small cell lung cancer enriches for resistant subpopulation which can be prevented by treatment with the multikinase inhibitor sorafenib via inhibition of MKNK, STAT3 and MCL1.

Artificial Intelligence for Organelle Segmentation in Live-Cell Imaging

JUST PUBLISHED: artificial intelligence for organelle segmentation in live-cell imaging

Click here to read the latest free, Open Access article from Research, a Science Partner Journal.

Investigations into organelles illuminate the intricate interplay of cellular systems, uncovering how specialized structures orchestrate homeostasis, regulate metabolic pathways, and modulate signal transduction. The structural and functional integrity of organelles, including mitochondria, ER, GA, and lysosomes, is critical for cellular health. Deviations in organelle shape and behavior are frequently associated with disease development [51]. Consequently, precise characterization of organelles is crucial for advancing our understanding of cell biology and mechanisms.

Organelle image segmentation is important for extracting precise spatial and structural information, forming the foundation for subsequent quantitative analyses. Unlike whole-cell or nuclear, organelle segmentation is inherently more challenging due to the smaller size, irregular shapes, and intricate distributions of these structures. Additionally, many organelles exhibit dynamic behaviors such as fusion, fission, and trafficking, requiring accurate segmentation across both temporal and spatial dimensions. Advances in segmentation technologies have notably improved the ability to identify and characterize organelles with high-precision accuracy, opening new avenues for understanding cellular functions in health and disease.

Abnormal protein activity found to promote cell migration and spread of glioblastoma

Ever wondered how the different cells in our body communicate with each other to fulfill their different roles-be it cells repairing a tissue injury or immune cells moving towards an invading pathogen (microorganisms that causes disease) to engulf it? To move forward or migrate, cells must exert forces or interact with their surrounding environment. Interestingly, however, a fault in these interactions can also be the reason for spread of deadly cancer cells, such as in glioblastoma or brain tumor. While the importance of these interactions is well-understood, the machinery involved in these interactions at the molecular level remains a mystery.

Now, a team of researchers led by Professor Naoyuki Inagaki from Nara Institute of Science and Technology, Japan, along with Dr. Yonehiro Kanemura from NHO Osaka National Hospital, Japan; Dr. Tatsuo Kinashi from Kansai Medical University, Japan; and Dr. Daisuke Kawauchi from Nagoya City University, Japan, has identified the underlying mechanism involving a protein called shootin1b that promotes cell migration or movement in glioblastoma. The study was published online in Advanced Science on August 13, 2025.

“We discovered that an abnormal activity of shootin1b promotes the movement of cancer cells and spread of glioblastoma, the most common and difficult to treat brain tumor in adults,” explains Professor Inagaki.

New nanoparticles stimulate the immune system to attack ovarian tumors

A team, including researchers in MIT ChemE, designed new nanoparticles that can deliver an immune-stimulating molecule called IL-12 directly to ovarian tumors. When given along with immunotherapy drugs called checkpoint inhibitors, IL-12 helps the immune system launch an attack on cancer cells.

“What’s really exciting is that we’re able to deliver IL-12 directly in the tumor space. And because of the way that this nanomaterial is designed to allow IL-12 to be borne on the surfaces of the cancer cells, we have essentially tricked the cancer into stimulating immune cells to arm themselves against that cancer,” says MIT ChemE Professor Paula Hammond, a senior author of the study.

📸: Courtesy of the researchers.

MIT researchers designed nanoparticles that can deliver an immune-stimulating molecule called IL-12 directly to ovarian tumors. When given to mice along with checkpoint inhibitors, the treatment eliminated metastatic tumors more than 80 percent of the time.

‘Ready-made’ T-cell gene therapy tackles ‘incurable’ T-cell leukemia

A new treatment using genome-edited immune cells, developed by scientists at UCL (University College London) and Great Ormond Street Hospital (GOSH), has shown promising results in helping children and adults fight a rare and aggressive form of blood cancer called T-cell acute lymphoblastic leukemia (T-ALL).

The world-first gene therapy (BE-CAR7) uses base-edited immune cells to treat previously untreatable T-cell leukemia and help patients achieve remission, offering new hope for families facing this aggressive cancer. Base-editing is an advanced version of CRISPR technology, that can precisely change single letters of DNA code inside living cells.

In 2022, researchers from GOSH and UCL delivered the world’s first treatment made using “base-editing” to a 13-year-old girl from Leicester, Alyssa.

Ancient sea anemone sheds light on animal cell type evolution

One of the biggest quests in biology is understanding how every cell in an animal’s body carries an identical genome yet still gives rise to a kaleidoscope of different cell types and tissues. A neuron doesn’t look nor behave like a muscle cell but has the same DNA.

Researchers think it comes down to how cells allow different parts of the genome to be read. Controlling these permissions are regulatory elements, regions of the genome which switch genes on or off. A detailed overview of how they do this is largely restricted to a handful of classic model organisms like mice and fruit flies.

Prevalence and Factors Associated With Atrial Fibrillation Among Young Patients With Ischemic Stroke

Stra8 links neuronal activity to inhibitory circuit protection in the adult mouse brain.

Huang et al. show that Stra8, a gene previously thought to be germline specific, is expressed in the adult mouse hippocampus in an activity-dependent manner. Stra8 protects neuronal integrity and cognition by regulating neuromodulator genes and preserving inhibitory circuit function.

How natural daylight can help people with diabetes improve blood sugar levels

People with type 2 diabetes may be able to improve their blood sugar by doing something as simple as sitting by a window for a few hours each day. In a study published in Cell Metabolism, scientists showed that natural daylight helps maintain healthy glucose levels.

Daylight is known to be a mood enhancer and also beneficial for our health. However, according to the research team, most people living in Western societies typically stay indoors around 80% to 90% of the time under artificial light, which is not as bright or dynamic as sunlight. This is important because the human body operates on circadian rhythms, internal 24-hour clocks that orchestrate a range of biological processes, such as digestion and temperature regulation. These are synchronized by light, and a lack of natural light is a risk factor for type 2 diabetes.

Previous studies have shown that artificial light at night disrupts these rhythms and that daylight outdoors can improve the body’s response to insulin, which helps control blood sugar levels. But no prior research examined how natural light entering a window affects people with diabetes.

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